About this Course
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Start instantly and learn at your own schedule.

Flexible deadlines

Reset deadlines in accordance to your schedule.

Beginner Level

Approx. 20 hours to complete

Suggested: 5 hours/week...

English

Subtitles: English

100% online

Start instantly and learn at your own schedule.

Flexible deadlines

Reset deadlines in accordance to your schedule.

Beginner Level

Approx. 20 hours to complete

Suggested: 5 hours/week...

English

Subtitles: English

Syllabus - What you will learn from this course

Week
1
5 hours to complete

Introduction to Reproducible Research and Dynamic Documentation

11 videos (Total 75 min), 6 readings, 2 quizzes
11 videos
Dynamic Documentation and Literate Programming5m
Components and Examples of Reproducibility8m
R and RStudio Introduction8m
Git and Github - Part 112m
Git and Github - Part 213m
Git and Github - Part 36m
Creating Your First Document9m
Wrap-Up41s
6 readings
Course Outline and Grading Information5m
Articles, Resources, and File Organization Examples1h
[Lecture Prep] - Links for R and RStudio1m
R and RStudio Resources30m
[Lecture Prep] - GIT and GitHub5m
Books on Reproducibility and Tools of the Trade45m
2 practice exercises
Practice20m
Week 130m
Week
2
4 hours to complete

R Markdown: Syntax, Document, and Presentation Formats

8 videos (Total 83 min), 11 readings, 2 quizzes
8 videos
Figures, Tables, and Equations14m
Images, Videos, and Footnotes9m
Presentation Formats16m
Book Format16m
Wrap-Up1m
11 readings
[Lecture Prep] - Links for R Markdown and YAML1m
[Lecture Prep] - R Markdown File1m
R Markdown Resources30m
Resources for Tables and Equations25m
[Lecture Prep] - Media and R Markdown Files1m
Resource for Embedding Videos5m
[Lecture Prep] - R Markdown File1m
Resources for the Presentation Format25m
[Lecture Prep] - Link for Bookdown Demo3m
Resources for the Book Format25m
[Graded Quiz Prep] - Week 2 Instructions5m
2 practice exercises
Practice20m
Week 240m
Week
3
4 hours to complete

R Markdown Templates: Processing and Customizing

9 videos (Total 93 min), 6 readings, 2 quizzes
9 videos
Customizing Other Document Formats10m
Working with R Packages12m
Building a Document Template, Part 112m
Building a Document Template, Part 210m
Adding Parameters in a Document Template15m
Wrap-Up58s
6 readings
[Lecture Prep] - CSS File1m
Note on MD files3m
Resources for Customizing Documents40m
[Lecture Prep] - R Script File1m
[Lecture Prep] - Code File1m
Resources for Parameters and Template Development1h
2 practice exercises
Practice20m
Week 330m
Week
4
3 hours to complete

Leveraging Custom Templates from Leading Scientific Journals

6 videos (Total 47 min), 3 readings, 2 quizzes
6 videos
Create an R Markdown Template and Share It10m
Create an R Package with an R Markdown Template11m
Wrap-Up44s
3 readings
Custom Template Packages and References1h
Resources for Packages and Forking Repositories30m
[Lecture Prep] - Code File1m
2 practice exercises
Practice20m
Week 430m
4.7
4 ReviewsChevron Right

Top reviews from Reproducible Templates for Analysis and Dissemination

By VFFeb 22nd 2018

Perfect amount of info for beginner and/or intermediate R user who has not taken full advantage of its capabilities (yet)

Instructor

Avatar

Melinda Higgins

Associate Research Professor/Senior Biostatistician
School of Nursing

About Emory University

Emory University, located in Atlanta, Georgia, is one of the world's leading research universities. Its mission is to create, preserve, teach and apply knowledge in the service of humanity....

Frequently Asked Questions

  • Once you enroll for a Certificate, you’ll have access to all videos, quizzes, and programming assignments (if applicable). Peer review assignments can only be submitted and reviewed once your session has begun. If you choose to explore the course without purchasing, you may not be able to access certain assignments.

  • When you purchase a Certificate you get access to all course materials, including graded assignments. Upon completing the course, your electronic Certificate will be added to your Accomplishments page - from there, you can print your Certificate or add it to your LinkedIn profile. If you only want to read and view the course content, you can audit the course for free.

More questions? Visit the Learner Help Center.